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= Introduction =

This guide begins with a section on FreeviewGeneralUsage that explains how to use Freeview to view anatomical data and gives an overview of the interface. The FreeviewWorkingWithData section then covers each type of data that can be viewed and changed and how to use the tools relating to each. It ends with a FreeviewReference section covering menus, tools, and command line options.		  1. [[FreeviewGuide/FreeviewIntroduction|FreeviewIntroduction]]
 1. [[FreeviewGuide/FreeviewGeneralUsage|FreeviewGeneralUsage]]
  1. [[FreeviewGuide/FreeviewGeneralUsage/FreeviewQuickStart|FreeviewQuickStart]]
  1. [[FreeviewGuide/FreeviewGeneralUsage/FreeviewInterface|FreeviewInterface]]
  1. [[FreeviewGuide/FreeviewGeneralUsage/FreeviewViewingArea|FreeviewViewingArea]]
  1. [[FreeviewGuide/FreeviewGeneralUsage/FreeviewNavigation|FreeviewNavigation]]
  1. [[FreeviewGuide/FreeviewGeneralUsage/FreeviewCursor|FreeviewCursor]]
  1. [[FreeviewGuide/FreeviewGeneralUsage/FreeviewSavingVolumes|FreeviewSavingVolumes]]
  1. [[FreeviewGuide/FreeviewGeneralUsage/FreeviewTips|FreeviewTips]]
 1. [[FreeviewGuide/FreeviewWorkingWithData|FreeviewWorkingWithData]]
  1. [[FreeviewGuide/FreeviewWorkingWithData/FreeviewAnatomicalVolumes|FreeviewAnatomicalVolumes]]
  1. [[FreeviewGuide/FreeviewWorkingWithData/FreeviewSegmentations|FreeviewSegmentations]]
  1. [[FreeviewGuide/FreeviewWorkingWithData/FreeviewRotation|FreeviewManualTransformation]]
  1. [[FreeviewGuide/FreeviewWorkingWithData/FreeviewSurfaces|FreeviewSurfaces]]
  1. [[FreeviewGuide/FreeviewWorkingWithData/FreeviewDTI|FreeviewDTI]]
  1. [[FreeviewGuide/FreeviewWorkingWithData/PointSet|PointSet]]
 1. [[FreeviewGuide/FreeviewTools|FreeviewTools]]
  1. [[FreeviewGuide/FreeviewTools/MeasureTool|MeasureTool]] [[FreeviewGuide/FreeviewTools/MeasureTool|{{attachment:MeasTool.jpg||height="22",width="22"}}]]
  1. [[FreeviewGuide/FreeviewTools/VoxelEdit|VoxelEdit]] [[FreeviewGuide/FreeviewTools/VoxelEdit|{{attachment:VoxEdit.jpg||height="22",width="22"}}]]
  1. [[FreeviewGuide/FreeviewTools/ReconEdit|ReconEdit]] [[FreeviewGuide/FreeviewTools/ReconEdit|{{attachment:recon_edit.jpg||height="22",width="22"}}]]
  1. [[FreeviewGuide/FreeviewTools/RoiEdit|RoiEdit]] [[FreeviewGuide/FreeviewTools/RoiEdit|{{attachment:RoiEdit.jpg||height="22",width="22"}}]]
  1. [[FreeviewGuide/FreeviewTools/PointSetEdit|PointSetEdit]] [[FreeviewGuide/FreeviewTools/PointSetEdit|{{attachment:PointSetEdit.jpg||height="22",width="22"}}]]
  1. [[FreeviewGuide/FreeviewTools/TransformVolume|TransformVolume]]
 1. [[FreeviewGuide/FreeviewReference|FreeviewReference]]
  1. [[FreeviewGuide/FreeviewReference/FreeviewMouseCommands|FreeviewMouseCommands]]
  1. [[FreeviewGuide/FreeviewReference/FreeviewMenus|FreeviewMenus]]
  1. [[FreeviewGuide/FreeviewReference/FreeviewCommandLineOptions|FreeviewCommandLineOptions]]

  1. FreeviewIntroduction

  2. FreeviewGeneralUsage

    1. FreeviewQuickStart

    2. FreeviewInterface

    3. FreeviewViewingArea

    4. FreeviewNavigation

    5. FreeviewCursor

    6. FreeviewSavingVolumes

    7. FreeviewTips

  3. FreeviewWorkingWithData

    1. FreeviewAnatomicalVolumes

    2. FreeviewSegmentations

    3. FreeviewManualTransformation

    4. FreeviewSurfaces

    5. FreeviewDTI

    6. PointSet

  4. FreeviewTools

    1. MeasureTool FreeviewGuide/FreeviewTools/MeasureTool

    2. VoxelEdit FreeviewGuide/FreeviewTools/VoxelEdit

    3. ReconEdit FreeviewGuide/FreeviewTools/ReconEdit

    4. RoiEdit FreeviewGuide/FreeviewTools/RoiEdit

    5. PointSetEdit FreeviewGuide/FreeviewTools/PointSetEdit

    6. TransformVolume

  5. FreeviewReference

    1. FreeviewMouseCommands

    2. FreeviewMenus

    3. FreeviewCommandLineOptions

FreeviewGuide (last edited 2017-10-31 16:38:56 by MorganFogarty)