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| = mri_convert = mri_convert - converts MRI data from any of a number of native formats to the specified format (usually COR) required for FreeSurfer processing |
## see dtrecon as an exmaple = Name = {{{ mri_convert - general purpose utility for file format conversion and volume resampling }}} |
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| command argA argB -flag1 <arg1> -flag2 <arg2> -flag3 <arg3> | {{{ mri_motion_correct [argA] -i [arg2] -o [arg3] [<options>] }}} |
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| argA Description argB Description |
{{{ [argA] description description }}} |
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| -flag1 <arg1> | {{{ -i [arg2] description description |
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| Description - flag2 <arg2> Description |
-o [arg3] description description }}} |
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| {{{ -f [fvalue] description description |
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| -flag3 <arg3> Description. |
-g [gvalue] description description }}} |
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| file1 Description file2 Description |
{{{ volume1 - description volume2 - description }}} |
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| command argA argB -flag1 foo -flag2 goo Description |
{{{ mri_convert foo -i f -o out }}} |
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| command argA argB -flag1 foo -flag2 goo -flag3 hoo Description |
{{{ mri_convert foo -i f -o out -f fvalue }}} |
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| ["command2"] ["command3"] |
["othercommand1"], ["othercommand2"] |
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| Command``Guide | FreeSurfer |
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| ## For example: ["Belliveau1991"] NameYear |
## For example: ["References/Belliveau1991"] ["References/NameYear"] = Description = |
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| Report bugs to <> | Report bugs to <analysis-bugs@nmr.mgh.harvard.edu> = Methods Description = |
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| Category``Stream``Command | CategoryFreeSurferCommandVolumeConversion |
Name
mri_convert - general purpose utility for file format conversion and volume resampling
Synopsis
mri_motion_correct [argA] -i [arg2] -o [arg3] [<options>]
Positional Arguments
[argA] description description
Required Flagged Arguments
-i [arg2] description description -o [arg3] description description
Optional Flagged Arguments
-f [fvalue] description description -g [gvalue] description description
Outputs
volume1 - description volume2 - description
Example 1
mri_convert foo -i f -o out
Example 2
mri_convert foo -i f -o out -f fvalue
See Also
- ["othercommand1"], ["othercommand2"]
Author
Links
References
- ["References/NameYear"]
Description
Reporting Bugs
Report bugs to <analysis-bugs@nmr.mgh.harvard.edu>
Methods Description