Diff for "FsTutorial/Sept2015CourseSchedule"

Differences between revisions 13 and 19 (spanning 6 versions)

FreeSurfer Course, September 28 - Oct 1

8:00 - 9:30am Registration Desk Open

Monday, September 28th - Introduction / Single Subject Analysis / Troubleshooting

Time	Title	Type	Lecturer
8:30 - 9:00	optional - Unix Tutorial for FreeSurfer Users	talk/tutorial	Allison Moreau
9:00 - 9:15	optional - Intro to FreeSurfer Jargon	talk	Allison Moreau & Lilla Zollei
9:15 - 9:30	break
9:30 - 10:00	Introduction to Freesurfer	talk	Bruce Fischl
10:00 - 11:10	Analyzing the Individual Subject	talk	Doug Greve
11:10 - 11:30	break
11:30 - 11:45	Freeview demonstration	demo	Lee Tirrell
11:45 - 12:00	Interaction with Individual Subject Data Tutorial	tutorial	staff
12:00 - 1:00	Lunch (Suggestions for where to eat)	--	--
1:00 - 1:45	Interaction with Individual Subject Data Tutorial	tutorial	staff
1:45 - 2:15	FreeSurfer Troubleshooting	talk	Bruce Fischl
2:15 - 2:35	break
2:35 - 3:35	Quality Checking a Recon	demo	Ani Varjabedian
3:35 - 4:35	Troubleshooting Tutorial	tutorial	staff

Answers to online questions here

Tuesday, September 29th - Group Analysis / Longitudinal Analysis / ROI Analysis

Time	Title	Type	Lecturer
9:00 - 9:30	optional - A Non-physicist's Intro to MR SpinBench	talk	Dylan Tisdall
9:30 - 10:00	Surface-based Analysis: Intersubject Smoothing & Registration	talk	Doug Greve
10:00 - 10:40	Group Analysis	talk	Emily Lindemer
10:40 - 11:00	break
11:00 - 11:40	Group Analysis Tutorial	tutorial	staff
11:40 - 12:00	Multiple Comparisons	talk	Doug Greve
12:00 - 1:00	Lunch	--	--
1:00 - 1:20	Multiple Comparisons Tutorial	tutorial	staff
1:20 - 1:40	QDEC demonstration	demo	Martin Reuter
1:40 - 2:20	QDEC Tutorial	tutorial	staff
2:20 - 2:40	break
2:40 - 3:10	Longitudinal FreeSurfer see also: LongitudinalProcessing	talk	Martin Reuter
3:10 - 3:50	Longitudinal Tutorial	tutorial	staff
3:50 - 4:00	break
4:00 - 4:30	ROI Analysis	talk	Doug Greve
4:30 - 5:00	ROI Analysis Tutorial	tutorial	staff
6:15 - ?	Boston Beer Works	social activity	staff

Answers to online questions here

Boston Beer Works location information here and here.
Meet us in front of Building 149 to catch the 6:15pm shuttle bus (it leaves on time!).
If you miss us, we are taking the MGH/Navy Yard shuttle to North Station. From there, cross the street to get to Canal Street.
Boston Beer Works will be down that street, on your right. (Shuttles depart every 15 minutes up until 7:15pm and every half hour after that).

Wednesday, September 30th - fMRI / Diffusion

Time	Title	Type	Lecturer
9:00 - 9:30	Multi-Modal Integration, Part 1	talk	Doug Greve
9:30 - 10:10	Introduction to Diffusion MRI	talk	Anastasia Yendiki
10:10 - 10:30	break
10:30 - 11:20	TRActs Constrained by UnderLying Anatomy (TRACULA)	talk	Anastasia Yendiki
11:20 - 12:05	Tracula Tutorial	tutorial	staff
12:05 - 1:05	Lunch	--	--
1:05 - 1:20	optional - Diffusion Weighting in MR	talk	Dylan Tisdall
1:20 - 2:20	Basics of fMRI Analysis	talk	Jon Polimeni
2:20 - 2:30	break & Evaluation
2:40 - 4:00	FSFAST	talk	Doug Greve
4:00 - 5:00	FSFAST Tutorial	tutorial	staff

Answers to online questions here

Thursday, October 1st - Troubleshooting / Multimodal Analysis / MRI Acquisition Tips / Future Directions

Time	Title	Type	Lecturer
9:00 - 10:00	optional - Q&A on Quality Checking Recons	Q&A/demo	Allison Stevens & staff
10:00 - 10:30	Multi-Modal Integration, Part 2	talk	Lilla Zollei
10:30 - 10:50	break
10:50 - 11:20	Multi-Modal Integration Tutorial	tutorial	staff
11:20 - 11:50	An Overview of Registration Methods	talk	Lilla Zollei
11:50 - 12:50	Lunch	--	--
12:50 - 1:20	MRI Acquisition Methods	talk	Andre van der Kouwe
1:20 - 1:50	Motion-compensated Neuroanatomical Imaging	talk	Dylan Tisdall
1:50 - 2:00	break
2:00 - 2:30	Future Directions	talk	TBD

Answers to online questions here

FsTutorial/Sept2015CourseSchedule (last edited 2017-09-26 11:31:49 by MorganFogarty)

-  ⇤ ← Revision 13 as of 2015-09-16 14:40:38 → 
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+   ← Revision 19 as of 2015-09-17 11:13:55 → ⇥
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-Answers to online questions [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/QuestionAnswers|here]]
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-=== 7:30 - 9:30am Registration Desk Open ===
+=== 8:00 - 9:30am Registration Desk Open ===
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-||11:30 - 12:10 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.surface-based-analysis.ppt|Surface-based Analysis: Intersubject Smoothing & Registration]] ||talk ||Doug Greve ||
||12:10 - 1:10 ||'''Lunch''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/lunch_map.jpg|(Suggestions for where to eat)]] ||-- ||-- ||
||1:10 - 1:40 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/FreeSurfer_Course_Apr_2013_MRI_Basics.pdf|A Non-physicist's Intro to MR]] [[http://www.heartvista.com/SpinBench|SpinBench]]'' '' ||talk ||Dylan Tisdall ||
||1:40 - 2:00 ||Freeview demonstration ||[[FreeviewGuide|demo]] ||Lee Tirrell ||
||2:00 - 3:00 ||[[FsTutorial/OutputData_freeview|Interaction with Individual Subject Data Tutorial]] ||tutorial ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/staff2013.jpg|staff]] ||
||3:00 - 3:20 ||'''break''' || || ||
||3:20 - 3:50 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/BostonMay2014/freesurfer.failure_modes.ppt|FreeSurfer Troubleshooting]] ||talk ||Bruce Fischl ||
||3:50 - 4:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/QArecon.ppt|Quality Checking a Recon]] ||demo ||Ani Varjabedian ||
+||11:30 - 11:45 ||Freeview demonstration ||[[FreeviewGuide|demo]] ||Lee Tirrell ||
||11:45 - 12:00 ||[[FsTutorial/OutputData_freeview|Interaction with Individual Subject Data Tutorial]] ||tutorial ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/staff2013.jpg|staff]] ||
||12:00 - 1:00 ||'''Lunch''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/lunch_map.jpg|(Suggestions for where to eat)]] ||-- ||-- ||
||1:00 - 1:45 ||[[FsTutorial/OutputData_freeview|Interaction with Individual Subject Data Tutorial]] ||tutorial ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/staff2013.jpg|staff]] ||
||1:45 - 2:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/BostonMay2014/freesurfer.failure_modes.ppt|FreeSurfer Troubleshooting]] ||talk ||Bruce Fischl ||
||2:15 - 2:35 ||'''break''' || || ||
||2:35 - 3:35 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/QArecon.ppt|Quality Checking a Recon]] ||demo ||Ani Varjabedian ||
||3:35 - 4:35 ||[[FsTutorial/TroubleshootingData|Troubleshooting Tutorial]] ||tutorial ||staff ||
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+Answers to online questions [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/QuestionAnswers|here]]
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-||9:00 - 10:00 ||[[FsTutorial/TroubleshootingData|Troubleshooting Tutorial]] ||tutorial ||staff ||
+||9:00 - 9:30 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/FreeSurfer_Course_Apr_2013_MRI_Basics.pdf|A Non-physicist's Intro to MR]] [[http://www.heartvista.com/SpinBench|SpinBench]]'' '' ||talk ||Dylan Tisdall ||
||9:30 - 10:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.surface-based-analysis.ppt|Surface-based Analysis: Intersubject Smoothing & Registration]] ||talk ||Doug Greve ||
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-||11:40 - 12:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/BostonMay2014/freesurfer.multipecomparisons.ppt|Multiple Comparisons]] ||talk ||Martin Reuter ||
+||11:40 - 12:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/BostonMay2014/freesurfer.multipecomparisons.ppt|Multiple Comparisons]] ||talk ||Doug Greve ||
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+||6:15 - ? || Boston Beer Works || social activity ||staff ||
Answers to online questions [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/QuestionAnswers|here]]
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+Line 47:
-'''Boston Beer Works location information [[http://www.beerworks.net/html/locations_canal.html|here]] and [[http://maps.google.com/maps?f=q&source=s_q&hl=en&geocode=&q=112+Canal+Street+Boston,+MA+02114&aq=&sll=37.0625,-95.677068&sspn=44.25371,54.228516&ie=UTF8&hq=&hnear=112+Canal+St,+Boston,+Massachusetts+02114&ll=42.367359,-71.058776&spn=0.010131,0.013239&z=16|here]].'''<<BR>> Meet us in front of [[http://surfer.nmr.mgh.harvard.edu/fswiki/CourseDescription#Map|Building 149]] to catch the 6:15pm shuttle bus (it leaves on time!). <<BR>> If you miss us, we are taking the MGH/Navy Yard shuttle to North Station. From there, cross the street to get to Canal Street. Boston Beer Works will be down that street, on your right. (If you miss the 6:15 bus, the next few buses depart at 6:30pm, 6:45pm, 7pm, 7:15pm, and 7:45pm).
+'''Boston Beer Works location information [[http://www.beerworks.net/html/locations_canal.html|here]] and [[http://maps.google.com/maps?f=q&source=s_q&hl=en&geocode=&q=112+Canal+Street+Boston,+MA+02114&aq=&sll=37.0625,-95.677068&sspn=44.25371,54.228516&ie=UTF8&hq=&hnear=112+Canal+St,+Boston,+Massachusetts+02114&ll=42.367359,-71.058776&spn=0.010131,0.013239&z=16|here]].'''<<BR>> Meet us in front of [[http://surfer.nmr.mgh.harvard.edu/fswiki/CourseDescription#Map|Building 149]] to catch the 6:15pm shuttle bus (it leaves on time!). <<BR>> If you miss us, we are taking the MGH/Navy Yard shuttle to North Station. From there, cross the street to get to Canal Street. <<BR>>Boston Beer Works will be down that street, on your right. (Shuttles depart every 15 minutes up until 7:15pm and every half hour after that).
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+Answers to online questions [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/QuestionAnswers|here]]
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-||1:20 - 1:50 ||'''Tech talk -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/FreeSurfer_Course_Apr_2013_Motion_Correction.pdf|Motion-compensated Neuroanatomical Imaging]] ||talk ||Dylan Tisdall ||
+||1:20 - 1:50 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/FreeSurfer_Course_Apr_2013_Motion_Correction.pdf|Motion-compensated Neuroanatomical Imaging]] ||talk ||Dylan Tisdall ||
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+Answers to online questions [[http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/QuestionAnswers|here]]