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[[FsTutorial|Back to Top Tutorial Page]]<<BR>><<BR>> [[FsTutorial|Back to Tutorial Homepage]]<<BR>><<BR>>
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<<BR>>
The purpose of this tutorial is
to get you acquainted with the concepts needed to perform multimodal integration in FreeSurfer by interacting with both fMRI and DTI data. You will not learn how to perform fMRI or DTI analysis here; that knowledge is already assumed. This tutorial also does not assume any particular directory structure (as would happen in FS-FAST). This tutorial makes use of fMRI data from the Functional Biomedical Informatics Research Network (fBIRN, [[http://www.nbirn.net|www.nbirn.net]]).<<BR>><<BR>>
[[FsTutorial/MultiModalRegistration|A. Multimodal Registration]] <<BR>>
[[FsTutorial/MultiModalFmriIndividual|B. Individual fMRI Integration]] <<BR>>
[[FsTutorial/MultiModalFmriGroup|C. Surface-based Group fMRI Analysis]] <<BR>>
[[FsTutorial/MultiModalDtiIndividual|D. Individual DTI Integration]] <<BR>>
The purpose of these tutorials are to get you acquainted with the concepts needed to perform multimodal integration in FreeSurfer by interacting with fMRI data. You will not learn how to perform fMRI analysis here; that knowledge is already assumed. This tutorial also does not assume any particular directory structure (as would happen in FS-FAST). This tutorial makes use of fMRI data from the Functional Biomedical Informatics Research Network (fBIRN, [[http://www.nbirn.net|www.nbirn.net]]).<<BR>><<BR>>

For Part 1 of the !MultiModal tutorial, please complete the section on multimodal registration:<<BR>>
[[FsTutorial/MultiModalRegistration_freeview|Multimodal Registration]] <<BR>>
##[[FsTutorial/MultiModalDtiIndividual_freeview|B. Individual DTI Integration]] <<BR>>
##[[FsTutorial/MultiModalFmriIndividual_freeview|B. Individual fMRI Integration]] <<BR>>
For Part 2 of the !MultiModal tutorial, please complete the sections on fMRI integration and group analysis:<<BR>>
##[[FsTutorial/MultiModalDtiIndividual_freeview
|C. Individual DTI Integration]] <<BR>>
[[FsTutorial/MultiModalFmriIndividual_freeview| Individual fMRI Integration]] <<BR>>
[[FsTutorial/MultiModalFmriGroup_freeview|
Surface-based Group fMRI Analysis]] <<BR>>

Multimodal integration can also be done using DTI data. This is demonstrated in the Diffusion tutorial:<<BR>>
[[FsTutorial/Diffusion|Diffusion and DTI Integration]]

Back to Tutorial Homepage

Multimodal Integration


The purpose of these tutorials are to get you acquainted with the concepts needed to perform multimodal integration in FreeSurfer by interacting with fMRI data. You will not learn how to perform fMRI analysis here; that knowledge is already assumed. This tutorial also does not assume any particular directory structure (as would happen in FS-FAST). This tutorial makes use of fMRI data from the Functional Biomedical Informatics Research Network (fBIRN, www.nbirn.net).

For Part 1 of the MultiModal tutorial, please complete the section on multimodal registration:
Multimodal Registration

For Part 2 of the MultiModal tutorial, please complete the sections on fMRI integration and group analysis:

Individual fMRI Integration
Surface-based Group fMRI Analysis

Multimodal integration can also be done using DTI data. This is demonstrated in the Diffusion tutorial:
Diffusion and DTI Integration

FsTutorial/MultiModal_freeview (last edited 2018-02-26 10:04:56 by BramDiamond)