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| === Monday, December 12th - Introduction / Single Subject / MRI / Longitudinal/ Troubleshooting === ||'''Time''' ||'''Title''' ||'''Type''' ||'''Lecturer''' || ||8:00 - 8:30 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/unix_tutorial_FS_course.ppt|Unix Tutorial for FreeSurfer Users]] [[http://www.ee.surrey.ac.uk/Teaching/Unix|online practice]] ||tutorial ||Allison Stevens || ||8:30 - 9:00 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsjargon.ppt|Intro to FreeSurfer Jargon|&do=get]] ||talk ||Allison Stevens || ||8:30 - 9:00 ||'''Course Registration''' ||sign-in ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/staff2011.jpg|staff]] || ||9:00 - 9:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.intro.ppt|Introduction to Freesurfer]] ||talk ||Bruce Fischl || ||9:30 - 10:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsrecon.ppt|Analyzing the Individual Subject]] ||talk ||Doug Greve || ||10:30 - 10:50 ||'''break''' || || || ||10:50 - 11:20 ||Tkmedit/Tksurfer demonstration ||demo ||Doug Greve || ||11:20 - 11:50 ||[[FsTutorial/OutputData|Interaction with Individual Subject Data Tutorial]] ||tutorial ||staff || ||11:50 - 12:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.surface-based-analysis.ppt|Surface-based Smoothing/Surface-based Registration|&do=get]] ||talk ||Doug Greve || ||12:30 - 1:30 ||'''Lunch''' [[attachment:lunch_map.jpg| (Suggestions)]]||-- ||-- || ||''1:00 - 1:30'' ||''Optional Lunch Talk''- '' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/mri_basics.pdf|A Non-physicist's Intro to MR|&do=get]] [[http://www.heartvista.com/SpinBench|SpinBench]]'' ||''talk'' ||''Dylan Tisdall'' || ||1:30 - 2:15 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.registration.ppt|Registration Methods|&do=get]] || talk || Lilla Zollei || ||2:15- 2:55 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.failure_modes.ppt|Failure Modes|&do=get]] ||talk ||Bruce Fischl || ||2:55 - 3:15 ||'''break''' || || || ||3:15 - 3:35 ||Troubleshooting Demonstration || demo || Allison || ||3:35 - 4:35 || [[FsTutorial/TroubleshootingData|Troubleshooting Tutorial]] ||tutorial ||staff || ||4:35 - 5:30 || Quality Checking a Recon ||demo ||Allison Stevens || ||5:30 - ||'''optional -''' [[DownloadAndInstall|FreeSurfer Installation on Personal Laptops]] ||one-on-one || staff || ||5:30 - ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/runningyourdata.ppt|Start Processing Your Own Data|&do=get]] ||one-on-one || staff || |
=== Monday, December 12th - Introduction / Single Subject / Registration / Troubleshooting === ||'''Time''' ||'''Title''' ||'''Type''' ||'''Lecturer''' || '''Give us your feedback''' || ||8:00 - 8:30 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/unix_tutorial_FS_course.ppt|Unix Tutorial for FreeSurfer Users]] [[http://www.ee.surrey.ac.uk/Teaching/Unix|online practice]] ||tutorial ||Allison Stevens || [[https://docs.google.com/spreadsheet/viewform?formkey=dHoxeWZGZktvSk1PY0laUXhacm9SUVE6MQ| Rate it!]]|| ||8:30 - 9:00 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsjargon.ppt|Intro to FreeSurfer Jargon|&do=get]] ||talk ||Allison Stevens || [[https://docs.google.com/spreadsheet/viewform?formkey=dDF5NU5aYVVVU2tiTkwtWTc2X3JWOGc6MA| Rate it!]]|| ||8:30 - 9:00 ||'''Course Registration''' ||sign-in ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/staff2011.jpg|staff]] || || ||9:00 - 9:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.intro.ppt|Introduction to Freesurfer]] ||talk ||Bruce Fischl || [[https://docs.google.com/spreadsheet/viewform?formkey=dEtkaFJpUTRLd3NLSW9GUjFobEx1Qmc6MA| Rate it!]]|| ||9:30 - 10:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsrecon.ppt|Analyzing the Individual Subject]] ||talk ||Doug Greve || [[https://docs.google.com/spreadsheet/viewform?formkey=dEdYdm5WaVd3bVdSdU0zMXo1cUdtenc6MA| Rate it!]]|| ||10:30 - 10:50 ||'''break''' || || || || ||10:50 - 11:20 ||Tkmedit/Tksurfer demonstration ||demo ||Doug Greve || [[https://docs.google.com/spreadsheet/viewform?formkey=dEtWdXZZRXdoVnk5ZG1NcnNCZmdZZGc6MA| Rate it!]]|| ||11:20 - 11:50 ||[[FsTutorial/OutputData|Interaction with Individual Subject Data Tutorial]] ||tutorial ||staff || [[https://docs.google.com/spreadsheet/viewform?formkey=dFJaZjVXWHlsYUpTaXItLUxJWjlrelE6MA| Rate it!]]|| ||11:50 - 12:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.surface-based-analysis.ppt|Surface-based Smoothing/Surface-based Registration|&do=get]] ||talk ||Doug Greve || [[https://docs.google.com/spreadsheet/viewform?formkey=dDE5eWlFSmpQR0ZrZEFrQWJLVjZuTnc6MA| Rate it!]]|| ||12:30 - 1:30 ||'''Lunch''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/lunch_map.jpg| (Suggestions for where to eat)]]||-- ||-- || ||''1:00 - 1:30'' ||''Optional Lunch Talk''- '' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/FreeSurfer_Course_Dec_12_2011_MRI_Basics.pdf|A Non-physicist's Intro to MR|&do=get]] [[http://www.heartvista.com/SpinBench|SpinBench]]'' ||''talk'' ||''Dylan Tisdall'' || [[https://docs.google.com/spreadsheet/viewform?formkey=dGdoMmtpdjc1LXZiSm1JZWsySVBnZ2c6MA| Rate it!]]|| ||1:30 - 2:15 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.registration.ppt|Registration Methods|&do=get]] || talk || Lilla Zollei || [[https://docs.google.com/spreadsheet/viewform?formkey=dGQzdXhUSGt6N2FwWEIzYm04WkV1eEE6MA| Rate it!]]|| ||2:15- 2:55 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.failure_modes.ppt|Failure Modes|&do=get]] ||talk ||Bruce Fischl || [[https://docs.google.com/spreadsheet/viewform?formkey=dEZNdUJSOEhEUE41ZS0wREhjSm02SkE6MA| Rate it!]]|| ||2:55 - 3:15 ||'''break''' || || || || ||3:15 - 3:35 ||Troubleshooting Demonstration || demo || Allison ||[[https://docs.google.com/spreadsheet/viewform?formkey=dFEzNk04U1lLSE1heno3bC1TNmpBRkE6MA| Rate it!]]|| ||3:35 - 4:35 || [[FsTutorial/TroubleshootingData|Troubleshooting Tutorial]] ||tutorial ||staff || [[https://docs.google.com/spreadsheet/viewform?formkey=dGZtMXV2cWw1LUZ6WXVzazZkWl8zUGc6MA| Rate it!]]|| ||4:35 - 5:30 || Quality Checking a Recon ||demo ||Allison Stevens || [[https://docs.google.com/spreadsheet/viewform?formkey=dFROM0FnOGg2VU5TaTJoOHkxQ3lpeGc6MA|Rate it!]]|| ||5:30 - ||'''optional -''' [[DownloadAndInstall|FreeSurfer Installation on Personal Laptops]] ||one-on-one || staff || [[https://docs.google.com/spreadsheet/viewform?formkey=dFgydlJTRVRLaC1IUG9EeHhSeFpTclE6MA|Rate it!]]|| ||5:30 - ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/runningyourdata.ppt|Start Processing Your Own Data|&do=get]] ||one-on-one || staff || [[https://docs.google.com/spreadsheet/viewform?formkey=dEtxNDlDWGRhSjdTd19NZjVQQUVZeUE6MA|Rate it!]]|| |
| Line 28: | Line 28: |
| If you miss us, we are taking the 6:45pm MGH/Navy Yard shuttle to North Station (the next one departs at 6:45pm). From there, you cross the street and go down Canal Street. Boston Beer Works will be on your right. | If you miss us, we are taking the 6:45pm MGH/Navy Yard shuttle to North Station (the next few buses depart at 7pm, 7:15pm, and 7:45pm). From there, you cross the street and go down Canal Street. Boston Beer Works will be on your right. |
| Line 31: | Line 32: |
| === Tuesday, December 13th - Group Analysis/ ROIs / Registration / Diffusion === ||'''Time''' ||'''Title''' ||'''Type''' ||'''Lecturer''' || ||9:00 - 10:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.roi.ppt|ROI Analysis|&do=get]] ||talk ||Doug Greve || ||10:00 - 10:30 ||[[FsTutorial/AnatomicalROI|ROI Analysis Tutorial]] ||tutorial ||staff || |
=== Tuesday, December 13th - ROIs / Longitudinal / Multimodal / Group Analysis === ||'''Time''' ||'''Title''' ||'''Type''' ||'''Lecturer''' || '''Give us your feedback''' || ||9:00 - 10:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.roi.ppt|ROI Analysis|&do=get]] ||talk ||Doug Greve || [[https://docs.google.com/spreadsheet/viewform?formkey=dGFhYUVwanFCcFhYeEJPSzIxU0pSeWc6MA| Rate it!]]|| ||10:00 - 10:30 ||[[FsTutorial/AnatomicalROI|ROI Analysis Tutorial]] ||tutorial ||staff || [[https://docs.google.com/spreadsheet/viewform?formkey=dGQwaXFrVnJxQ1Z2eURhZ1RuR0tnMlE6MA| Rate it!]]|| |
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| ||10:50 - 11:20 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.longitudinal.ppt|Longitudinal FreeSurfer|&do=get]] ''see also:'' LongitudinalProcessing ||talk ||Martin Reuter || ||11:20 - 12:10 ||[[FsTutorial/LongitudinalTutorial|Longitudinal Tutorial]] ||tutorial ||staff || |
||10:50 - 11:20 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.longitudinal.pdf|Longitudinal FreeSurfer|&do=get]] ''see also:'' LongitudinalProcessing ||talk ||Martin Reuter || [[https://docs.google.com/spreadsheet/viewform?formkey=dHhCcFFGcHVrdzZmTkR2RFpQSjh3bnc6MA| Rate it!]] || ||11:20 - 12:10 ||Freeview Demo, [[FsTutorial/LongitudinalTutorial|Longitudinal Tutorial]] ||tutorial ||staff || [[https://docs.google.com/spreadsheet/viewform?formkey=dGFDd21lOVljSEhnRTM3MWM5SjU3ZGc6MA| Rate it!]]|| |
| Line 39: | Line 40: |
| ||''12:40 - 1:10'' ||''Optional Lunch Talk''- ''[[http://surfer.nmr.mgh.harvard.edu/pub/docs/mri_acquisition.ppt|MRI Acquisition Methods for Morphometry|&do=get]]'' ||''talk'' ||''Andre van der Kouwe'' || ||1:10 - 1:40 ||Future Directions: [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.inferring_architectonics.ppt|Inferring architectonic boundaries from in-vivo MRI|&do=get]] ||talk ||Bruce Fischl || ||1:40 - 2:40 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.multimodal-integration.ppt|Multi-Modal Integration|&do=get]] ||talk ||Doug Greve || |
||''12:40 - 1:10'' ||''Optional Lunch Talk''- ''[[http://surfer.nmr.mgh.harvard.edu/pub/docs/mri_acquisition.ppt|MRI Acquisition Methods for Morphometry|&do=get]]'' ||''talk'' ||''Andre van der Kouwe'' || [[https://docs.google.com/spreadsheet/viewform?formkey=dEJaSDhJeUYycERmQ0hwTWhUVEh1dUE6MA| Rate it!]]|| ||1:10 - 1:40 ||Future Directions: [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.inferring_architectonics.ppt|Inferring architectonic boundaries from in-vivo MRI|&do=get]] ||talk ||Bruce Fischl || [[https://docs.google.com/spreadsheet/viewform?formkey=dGZZQnQwUVIyU0V3SVhaR3Vva1Utbmc6MA| Rate it!]]|| ||1:40 - 2:40 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.multimodal-integration.ppt|Multi-Modal Integration|&do=get]] ||talk ||Doug Greve || [[https://docs.google.com/spreadsheet/viewform?formkey=dHFpd2I5U2ROSjQwSU11N3Z4Tjhmcnc6MA| Rate it!]]|| |
| Line 43: | Line 44: |
| ||3:00 - 3:45 ||[[FsTutorial/MultiModal|Multi-Modal Integration Tutorial]] ||tutorial ||staff || ||3:45 - 4:45 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.groupanalysis.ppt|Group Analysis / GLM / Multiple Comparisons]] ||talk ||Mert Sabuncu || ||4:45 - 5:15 ||QDEC demonstration ||demo ||Nick Schmansky || ||5:15 - 6:15 ||[[FsTutorial/GroupAnalysis|Group Analysis / Multiple Comparisons - mri_glmfit Tutorial]] ||tutorial ||staff || ||5:15 - 6:15 ||[[FsTutorial/QdecGroupAnalysis|Group Analysis - qdec Tutorial]] ||tutorial ||staff || Alternatively: ||9:00 - 10:00 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.groupanalysis.ppt|Group Analysis / GLM / Multiple Comparisons]] ||talk ||Mert Sabuncu || ||10:00 - 10:30 ||QDEC demonstration ||demo ||Nick Schmansky || ||10:30 - 10:50 ||'''break''' || || || ||10:50 - 11:50 ||[[FsTutorial/GroupAnalysis|Group Analysis / Multiple Comparisons - mri_glmfit Tutorial]] ||tutorial ||staff || ||10:50 - 11:50 ||[[FsTutorial/QdecGroupAnalysis|Group Analysis - qdec Tutorial]] ||tutorial ||staff || ||11:50 - 12:50 ||'''Lunch''' ||-- ||-- || ||''12:15 - 12:45'' ||''Optional Lunch Talk''- ''[[http://surfer.nmr.mgh.harvard.edu/pub/docs/mri_acquisition.ppt|MRI Acquisition Methods for Morphometry|&do=get]]'' ||''talk'' ||''Andre van der Kouwe'' || ||12:50 - 1:20 ||Future Directions: [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.inferring_architectonics.ppt|Inferring architectonic boundaries from in-vivo MRI|&do=get]] ||talk ||Bruce Fischl || ||1:20 - 2:20 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.roi.ppt|ROI Analysis|&do=get]] ||talk ||Doug Greve || ||2:20 - 2:50 ||[[FsTutorial/AnatomicalROI|ROI Analysis Tutorial]] ||tutorial ||staff || ||2:50 - 3:10 ||'''break''' || || || ||3:10 - 3:40 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.longitudinal.ppt|Longitudinal FreeSurfer|&do=get]] ''see also:'' LongitudinalProcessing ||talk ||Martin Reuter || ||3:40 - 4:30 ||[[FsTutorial/LongitudinalTutorial|Longitudinal Tutorial]] ||tutorial ||staff || ||4:30 - 5:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.multimodal-integration.ppt|Multi-Modal Integration|&do=get]] ||talk ||Doug Greve || ||5:30 - 6:15 ||[[FsTutorial/MultiModal|Multi-Modal Integration Tutorial]] ||tutorial ||staff || |
||3:00 - 3:45 ||[[FsTutorial/MultiModal|Multi-Modal Integration Tutorial]] ||tutorial ||staff || [[https://docs.google.com/spreadsheet/viewform?formkey=dG1tMHg0M2xMSmZmcjBzVWV3TDZLZ0E6MA| Rate it!]]|| ||3:45 - 4:45 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.groupanalysis.ppt|Group Analysis / GLM / Multiple Comparisons]] ||talk || J. Eugenio Iglesias || [[https://docs.google.com/spreadsheet/viewform?formkey=dHlYOHlFYjQzOENhb3JaOWl4SjRiUVE6MA| Rate it!]]|| ||4:45 - 5:15 ||QDEC demonstration ||demo ||Nick Schmansky || [[https://docs.google.com/spreadsheet/viewform?formkey=dDNwZXg5eG1Fc3E1RnJQcDNoM1VRdlE6MA| Rate it!]]|| ||5:15 - 6:15 ||[[FsTutorial/GroupAnalysis|Group Analysis / Multiple Comparisons - mri_glmfit Tutorial]] ||tutorial ||staff || [[https://docs.google.com/spreadsheet/viewform?formkey=dEJaWVhJbkFDUm1iUU9hcmdNWWxjaXc6MA| Rate it! ]]|| ||5:15 - 6:15 ||[[FsTutorial/QdecGroupAnalysis|Group Analysis - qdec Tutorial]] ||tutorial ||staff || [[https://docs.google.com/spreadsheet/viewform?formkey=dDlpa05FZlZCLUh5N0U0U0JlVkxFQlE6MA| Rate it!]]|| |
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| === Wednesday, December 14th - Multi-Modal / Future Directions / fMRI / Q&A === ||9:00 - 10:00 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fmri.april2011.pdf|Basics of fMRI Analysis|&do=get]] ||talk ||Doug Greve || |
=== Wednesday, December 14th - fMRI / Diffusion / Q&A === [[https://docs.google.com/spreadsheet/viewform?formkey=dHVDa09yN0g1VHQzRGlEdTdiQU1xZFE6MA |The Course Evaluation has been posted. ]] Please feel free to start filling it out! ||'''Time''' ||'''Title''' ||'''Type''' ||'''Lecturer''' || '''Give us your feedback''' || ||9:00 - 10:00 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/fmri.april2011.pdf|Basics of fMRI Analysis|&do=get]] ||talk || Jon Polimeni || [[https://docs.google.com/spreadsheet/viewform?formkey=dGpsTlZaa2pNRWxacnRHQnk0MG9IUVE6MA| Rate it!]]|| |
| Line 70: | Line 57: |
| ||10:20 - 11:40 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsfast.april2011.ppt|FSFAST|&do=get]] ||talk ||Doug Greve || ||11:40 - 12:40 ||[[FsFastTutorialV5.1|FSFAST Tutorial]] ||tutorial ||staff || |
||10:20 - 11:40 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsfast.april2011.ppt|FSFAST|&do=get]] ||talk ||Doug Greve || [[https://docs.google.com/spreadsheet/viewform?formkey=dHZCWlpYcU8tWGNtdHJIRmc3VjlMMUE6MA| Rate it!]]|| ||11:40 - 12:40 ||[[FsFastTutorialV5.1|FSFAST Tutorial]] ||tutorial ||staff || [[ https://docs.google.com/spreadsheet/viewform?formkey=dHBXU2FQMVJjVndjNjI4S1hhYmpkWkE6MA| Rate it!]]|| |
| Line 73: | Line 60: |
| ||''1:10 - 1:40'' ||''Optional Lunch Talk''- ''[[http://surfer.nmr.mgh.harvard.edu/pub/docs/motion_correction.pdf|Motion-compensated neuroanatomical imaging|&do=get]]'' ||''talk'' ||''Dylan Tisdall'' || ||1:40 - 2:40 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/dmri,fs.ppt|Introduction to Diffusion MRI|&do=get]] ||talk ||Anastasia Yendiki || ||2:40 - 3:25 ||[[FsTutorial/Diffusion|Diffusion Processing Tutorial]] ||tutorial ||staff || ||3:25 - 3:45 ||'''break''' & [[https://spreadsheets.google.com/viewform?formkey=dGlVV3Bzb296bnBWN3lBc3l5U3lPUGc6MA|Evaluation]] || || || ||3:45 - 4:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/tracula,fs.ppt|TRActs Constrained by UnderLying Anatomy (TRACULA)|&do=get]] ||talk ||Anastasia Yendiki || ||4:15 - 5:00 ||[[FsTutorial/Tracula|Tracula Tutorial]] ||tutorial ||staff || ||5:00 - 5:30 ||Question and Answer Session, FsQuiz ||talk ||staff || |
||''1:10 - 1:40'' ||''Optional Lunch Talk''- ''[[http://surfer.nmr.mgh.harvard.edu/pub/docs/FreeSurfer_Course_Dec_14_2011_Motion_Correction.pdf|Motion-compensated neuroanatomical imaging|&do=get]]'' ||''talk'' ||''Dylan Tisdall'' || [[https://docs.google.com/spreadsheet/viewform?formkey=dFNGWE1wUjlwczVNWGJMYnpjUDRfSVE6MA| Rate it!]]|| ||1:40 - 2:40 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/dmri,fs.ppt|Introduction to Diffusion MRI|&do=get]] ||talk ||Anastasia Yendiki || [[https://docs.google.com/spreadsheet/viewform?formkey=dGZYT201c1FlZzZtNzBfVDMyZl85cEE6MA| Rate it!]]|| ||2:40 - 3:25 ||[[FsTutorial/Diffusion|Diffusion Processing Tutorial]] ||tutorial ||staff || [[https://docs.google.com/spreadsheet/viewform?formkey=dHVnRmI0eTZOZDdxX3hPRjZjaE5USVE6MA| Rate it!]]|| ||3:25 - 3:45 ||'''break''' & [[https://docs.google.com/spreadsheet/viewform?formkey=dHVDa09yN0g1VHQzRGlEdTdiQU1xZFE6MA | Evaluation]] || || || ||3:45 - 4:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/tracula,fs.ppt|TRActs Constrained by UnderLying Anatomy (TRACULA)|&do=get]] ||talk ||Anastasia Yendiki || [[https://docs.google.com/spreadsheet/viewform?formkey=dEl6ZS1fT0ZpMkNfVHZEcnVfUjBBT2c6MA| Rate it!]]|| ||4:15 - 5:00 ||[[FsTutorial/Tracula|Tracula Tutorial]] ||tutorial ||staff || [[https://docs.google.com/spreadsheet/viewform?formkey=dERyMFBoZUNfTkpXZ1JpLVJyWVN1S2c6MA| Rate it!]]|| ||5:00 - 5:30 ||Question and Answer Session, FsQuiz ||talk ||staff || [[https://docs.google.com/spreadsheet/viewform?formkey=dHJfWkd4QXNqTU42dThJQzAzNHAycHc6MA| Rate it! ]]|| |
FreeSurfer Course, December 12-14, 2011
MGH, Charlestown Navy Yard, Building 149, Conference Room A
Monday, December 12th - Introduction / Single Subject / Registration / Troubleshooting
Time |
Title |
Type |
Lecturer |
Give us your feedback |
8:00 - 8:30 |
optional - Unix Tutorial for FreeSurfer Users online practice |
tutorial |
Allison Stevens |
|
8:30 - 9:00 |
optional - Intro to FreeSurfer Jargon |
talk |
Allison Stevens |
|
8:30 - 9:00 |
Course Registration |
sign-in |
|
|
9:00 - 9:30 |
talk |
Bruce Fischl |
||
9:30 - 10:30 |
talk |
Doug Greve |
||
10:30 - 10:50 |
break |
|
|
|
10:50 - 11:20 |
Tkmedit/Tksurfer demonstration |
demo |
Doug Greve |
|
11:20 - 11:50 |
tutorial |
staff |
||
11:50 - 12:30 |
talk |
Doug Greve |
||
12:30 - 1:30 |
-- |
-- |
||
1:00 - 1:30 |
Optional Lunch Talk- A Non-physicist's Intro to MR SpinBench |
talk |
Dylan Tisdall |
|
1:30 - 2:15 |
talk |
Lilla Zollei |
||
2:15- 2:55 |
talk |
Bruce Fischl |
||
2:55 - 3:15 |
break |
|
|
|
3:15 - 3:35 |
Troubleshooting Demonstration |
demo |
Allison |
|
3:35 - 4:35 |
tutorial |
staff |
||
4:35 - 5:30 |
Quality Checking a Recon |
demo |
Allison Stevens |
|
5:30 - |
optional - FreeSurfer Installation on Personal Laptops |
one-on-one |
staff |
|
5:30 - |
optional - Start Processing Your Own Data |
one-on-one |
staff |
Boston Beer Works location information here and here.
Meet us at 6:40pm at the front of Building 149 (the entrance on the opposite side of the building from where the Course is held).
If you miss us, we are taking the 6:45pm MGH/Navy Yard shuttle to North Station (the next few buses depart at 7pm, 7:15pm, and 7:45pm). From there, you cross the street and go down Canal Street. Boston Beer Works will be on your right.
Tuesday, December 13th - ROIs / Longitudinal / Multimodal / Group Analysis
Time |
Title |
Type |
Lecturer |
Give us your feedback |
9:00 - 10:00 |
talk |
Doug Greve |
||
10:00 - 10:30 |
tutorial |
staff |
||
10:30 - 10:50 |
break |
|
|
|
10:50 - 11:20 |
talk |
Martin Reuter |
||
11:20 - 12:10 |
Freeview Demo, Longitudinal Tutorial |
tutorial |
staff |
|
12:10 - 1:10 |
Lunch |
-- |
-- |
|
12:40 - 1:10 |
Optional Lunch Talk- MRI Acquisition Methods for Morphometry |
talk |
Andre van der Kouwe |
|
1:10 - 1:40 |
Future Directions: Inferring architectonic boundaries from in-vivo MRI |
talk |
Bruce Fischl |
|
1:40 - 2:40 |
talk |
Doug Greve |
||
2:40 - 3:00 |
break |
|
|
|
3:00 - 3:45 |
tutorial |
staff |
||
3:45 - 4:45 |
talk |
J. Eugenio Iglesias |
||
4:45 - 5:15 |
QDEC demonstration |
demo |
Nick Schmansky |
|
5:15 - 6:15 |
tutorial |
staff |
||
5:15 - 6:15 |
tutorial |
staff |
Wednesday, December 14th - fMRI / Diffusion / Q&A
The Course Evaluation has been posted. Please feel free to start filling it out!
Time |
Title |
Type |
Lecturer |
Give us your feedback |
9:00 - 10:00 |
talk |
Jon Polimeni |
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10:00 - 10:20 |
break |
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|
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10:20 - 11:40 |
talk |
Doug Greve |
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11:40 - 12:40 |
tutorial |
staff |
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12:40 - 1:40 |
Lunch |
-- |
-- |
|
1:10 - 1:40 |
Optional Lunch Talk- Motion-compensated neuroanatomical imaging |
talk |
Dylan Tisdall |
|
1:40 - 2:40 |
talk |
Anastasia Yendiki |
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2:40 - 3:25 |
tutorial |
staff |
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3:25 - 3:45 |
break & Evaluation |
|
|
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3:45 - 4:15 |
talk |
Anastasia Yendiki |
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4:15 - 5:00 |
tutorial |
staff |
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5:00 - 5:30 |
Question and Answer Session, FsQuiz |
talk |
staff |
