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| #acl AdminGroup:read,write,delete,revert PedroOliveira: read,write,delete,revert All: | #acl AdminGroup:read,write,delete,revert PedroOliveira:read,write,delete,revert All:read == FreeSurfer Tutorial and Workshop in São Paulo, Brazil == === 11 & 12 March 2009 === The FreeSurfer Development Team is hosting a two-day course for beginner and experienced users of FreeSurfer. Day 1 will be an introduction to FreeSurfer (or a refresher for those more experienced). Day 2 will cover everything you need to know for analyzing your data. Topics are listed below. There are only 30 available spots for this course. The course will not cover FS-FAST or fMRI analysis. Computers will be provided to all pairs of registrants, which will have FreeSurfer and data already installed. Attendees will work in pairs (sharing a computer). The course will be held at São Paulo healthcare complex of HCFMUSP. Contact: Pedro Paulo de M. Oliveira Jr. ( ppj at netfilter dot com dot br ) === Location === [[http://www.hcnet.usp.br/|Hospital das Clínicas]] - [[attachment:HospitaldasClinicas.kmz|.kmz|&do=get]] - [[http://maps.google.com/maps?q=Avenida%20Dr%20Eneas%20de%20Carvalho%20Aguiar%2C%2044%20-%20S%C3%A3o%20Paulo%20-%20SP%20-%20Brazil&oe=utf-8&rls=org.mozilla:en-US:official&client=firefox-a&um=1&ie=UTF-8&sa=N&hl=en&tab=wl|Avenida Dr Eneas de Carvalho Aguiar, 44 - São Paulo - SP - Brazil]] - ([[http://www.atlanticahotels.com.br/atlantica%5Fing/hoteis/estrutura.asp?Numfuncionalidade=292&NumHotel=34&Cidade=S%E3o%20Paulo|hotel]],[[http://maps.google.com/maps?hl=en&q=rua%20Oscar%20Freire%2C%201948%20-%20Jardim%20Paulista%2C%20S%C3%A3o%20Paulo%20-%20SP%2C%2005409000%2C%20Brazil&um=1&ie=UTF-8&sa=N&tab=wl|map]]) The course will be held at the [[http://upload.wikimedia.org/wikipedia/commons/7/72/Hospitaldocancerdesp2.jpg|Cancer Center Building]], in the 6th floor auditorium. |
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| || 8:00 - 9:00 || Course Registration || sign-in || [[attachment:boston_fs_course_jan2009.jpg|staff|&do=get]] || || 8:00 - 8:30 || '''optional -''' Unix Tutorial for !FreeSurfer [[http://www.ee.surrey.ac.uk/Teaching/Unix|1. Surrey]], [[http://docstore.mik.ua/orelly/linux/lnut/index.htm|2. O'Reilly]] || tutorial || Allison Stevens || || 9:00 - 9:20 || [[attachment:freesurfer.intro.2009.ppt|Introduction to Freesurfer|&do=get]]|| talk || || || 9:20 - 10:00 || [[attachment:freesurfer.applications.2009.ppt|FreeSurfer Applications|&do=get]] || talk || || || 10:00 - 10:30 || [[attachment:freesurfer.reliability.2009.ppt|Accuracy, Reliability and Validation|&do=get]] || talk || || || 10:30 - 10:45 || '''break''' || || || || 10:45 - 11:45 || [[attachment:fsrecon.ppt|Analyzing the Individual Subject|&do=get]] || talk|| Nick Schmansky || || 11:45 - 12:30 || '''lunch''' || || || || 12:30 - 1:00 || Tkmedit/Tksurfer demonstration || demo || Nick Schmansky || || 1:00 - 1:30 || [[FsTutorial/OutputData|Interaction with Individual Subject Data]] || tutorial || staff || || 1:30 - 2:45 || [[attachment:freesurfer.groupanalysis.ppt|Group Analysis / GLM / Multiple Comparisons|&do=get]] || talk || Lilla Zollei || || 2:45 - 3:00 || QDEC demonstration || demo || Nick Schmansky || || 3:00 - 3:15 || '''break''' || || || |
|| 8:30 - 9:00 || Course Registration || sign-in || staff || || 9:00 - 9:20 || Introductions, and Unix tutorial for !FreeSurfer || tutorial || Pedro Paulo in Portuguese || || 9:20 - 9:50 || [[attachment:freesurfer.intro.2009.ppt|Introduction to Freesurfer|&do=get]] || talk || Nick Schmansky || || 9:50 - 10:30 || [[attachment:freesurfer.applications.2009b.ppt|FreeSurfer Applications|&do=get]] || talk || Nick Schmansky|| || 10:30 - 10:45 || '''coffee break''' || || || || 10:45 - 11:45 || [[attachment:course_individual_subject.ppt|Analyzing the Individual Subject|&do=get]] || talk|| Allison Stevens || || 11:45 - 12:00 || Tkmedit/Tksurfer demonstration || demo || Nick Schmansky || || 12:00 - 1:00 || '''lunch''' || || || || 1:00 - 1:45 || [[FsTutorial/OutputData|Interaction with Individual Subject Data]] || tutorial || staff || || 1:45 - 3:00 || [[attachment:freesurfer.groupanalysis.ppt|Group Analysis / GLM / Multiple Comparisons|&do=get]] || talk || Lilla Zollei || || 3:00 - 3:15 || QDEC demonstration || demo || Nick Schmansky || || 3:15 - 3:30 || '''coffee break''' || || || |
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| || 5:00 - || '''optional -''' [[DownloadAndInstall|FreeSurfer Installation on Personal Laptops]] || one-on-one || Nick Schmansky || || 5:00 - || '''optional -''' Start Processing Your Own Data || one-on-one || Allison Stevens || |
## || 5:00 - || '''optional -''' [[DownloadAndInstall|FreeSurfer Installation on Personal Laptops]] || one-on-one || Nick Schmansky / Pedro Paulo || ## || 5:00 - || '''optional -''' Start Processing Your Own Data || one-on-one || Allison Stevens / Lilla Zollei || |
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| || 10:45 - 11:00 || '''break''' || || || || 11:00 - 11:15 || [[attachment:freesurfer.failure_modes.2009.ppt|Failure Modes|&do=get]] || talk || Nick Schmansky || |
|| 10:45 - 11:00 || '''coffee break''' || || || || 11:00 - 11:15 || [[attachment:freesurfer.failure_modes.2009.ppt|Failure Modes|&do=get]] || talk || Allison Stevens || |
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| || 3:15 - 3:30 || '''break''' || || || || 3:30 - 4:30 || Question and Answer Session, FsQuiz || talk || staff || || 4:30 - 6:00 || Future Directions of !FreeSurfer || talk || Lilla Zollei || |
|| 3:15 - 3:30 || '''coffee break''' || || || || 3:30 - 4:30 || [[attachment:LZ.future.directions.combined.short.ppt|Future Directions of FreeSurfer|&do=get]] || talk || Lilla Zollei || || 4:30 - 5:30 || Question and Answer Session, FsQuiz || group session || staff || |
FreeSurfer Tutorial and Workshop in São Paulo, Brazil
11 & 12 March 2009
The FreeSurfer Development Team is hosting a two-day course for beginner and experienced users of FreeSurfer. Day 1 will be an introduction to FreeSurfer (or a refresher for those more experienced). Day 2 will cover everything you need to know for analyzing your data. Topics are listed below. There are only 30 available spots for this course. The course will not cover FS-FAST or fMRI analysis.
Computers will be provided to all pairs of registrants, which will have FreeSurfer and data already installed. Attendees will work in pairs (sharing a computer).
The course will be held at São Paulo healthcare complex of HCFMUSP.
Contact: Pedro Paulo de M. Oliveira Jr. ( ppj at netfilter dot com dot br )
Location
Hospital das Clínicas - .kmz - Avenida Dr Eneas de Carvalho Aguiar, 44 - São Paulo - SP - Brazil - (hotel,map)
The course will be held at the Cancer Center Building, in the 6th floor auditorium.
Wednesday, March 11th - Introduction / Single Subject / Group Analysis
Time |
Title |
Type |
Lecturer |
8:30 - 9:00 |
Course Registration |
sign-in |
staff |
9:00 - 9:20 |
Introductions, and Unix tutorial for FreeSurfer |
tutorial |
Pedro Paulo in Portuguese |
9:20 - 9:50 |
talk |
Nick Schmansky |
|
9:50 - 10:30 |
talk |
Nick Schmansky |
|
10:30 - 10:45 |
coffee break |
|
|
10:45 - 11:45 |
talk |
Allison Stevens |
|
11:45 - 12:00 |
Tkmedit/Tksurfer demonstration |
demo |
Nick Schmansky |
12:00 - 1:00 |
lunch |
|
|
1:00 - 1:45 |
tutorial |
staff |
|
1:45 - 3:00 |
talk |
Lilla Zollei |
|
3:00 - 3:15 |
QDEC demonstration |
demo |
Nick Schmansky |
3:15 - 3:30 |
coffee break |
|
|
3:15 - 4:15 |
tutorial |
staff |
|
4:15 - 5:00 |
tutorial |
staff |
Thursday, March 12th - ROIs / Troubleshooting / Multi-Modal / QA / Future Directions
Time |
Title |
Type |
Lecturer |
9:00 - 10:00 |
talk |
Allison Stevens |
|
10:00 - 10:45 |
tutorial |
staff |
|
10:45 - 11:00 |
coffee break |
|
|
11:00 - 11:15 |
talk |
Allison Stevens |
|
11:15 - 12:15 |
tutorial |
staff |
|
12:15 - 1:00 |
lunch |
|
|
1:00 - 2:15 |
talk |
Lilla Zollei |
|
2:15 - 3:15 |
tutorial |
staff |
|
3:15 - 3:30 |
coffee break |
|
|
3:30 - 4:30 |
talk |
Lilla Zollei |
|
4:30 - 5:30 |
Question and Answer Session, FsQuiz |
group session |
staff |