Differences between revisions 36 and 40 (spanning 4 versions)
Revision 36 as of 2008-02-01 16:44:47
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Editor: PratapKunwar
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Revision 40 as of 2008-02-01 20:28:11
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Editor: PratapKunwar
Comment:
Deletions are marked like this. Additions are marked like this.
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== Analysis == == PreAnalysis ==
 1. FsFastUnpackData
 1. FsFastLinkAnatData
 1. FsFastCreateParadigmFile
 1. FsFastPreprocessData
 1. FsFastRegisterToStructural
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 * FsFastIndividualAnalysis
 * FsFastIndividualRetinotopyAnalysis
 * FsFastAbBlockedAnalysis
 1. FsFastFirstLevelAnalysis
 1. FsFastComputeIndividualStatistics
 1. FsFastVisualizeIndividualVolume
 1. FsFastVisualizeIndividualSurface
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=== GroupAnalysis (Old Methods) ===
=== GroupVolumeAnalysis ===
 * AssembleData (isxconcat-sess)
 * GlmAnalysis (mri_glmfit)

=== GroupSurfaceAnalysis ===

   1. Assemble the Data (Volume)
   2. Quality Assurance (Volume)
   3. Group (Volume)
         1. Random Effects (RFx, OLS) (Volume)
         2. Weighted Random Effects (WRFx, WLS) (Volume)
         3. Fixed Effects (FFx) (Volume)
   4. Output and visualization (Volume)
   5. Correction for Multiple Comparisons/Cluster Analysis (Volume)

=== MISC (old) ===
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 * FsFastIndividualAnalysis
 * FsFastIndividualRetinotopyAnalysis
 * FsFastAbBlockedAnalysis

[wiki:FreeSurferWiki top]

FS-Fast Work Flows

Overview and Data Hierarchy

PreAnalysis

  1. FsFastUnpackData

  2. FsFastLinkAnatData

  3. FsFastCreateParadigmFile

  4. FsFastPreprocessData

  5. FsFastRegisterToStructural

First-Level (Individual)Analysis

  1. FsFastFirstLevelAnalysis

  2. FsFastComputeIndividualStatistics

  3. FsFastVisualizeIndividualVolume

  4. FsFastVisualizeIndividualSurface

Higher-Level (Group) Analysis

GroupVolumeAnalysis

GroupSurfaceAnalysis

  1. Assemble the Data (Volume)
  2. Quality Assurance (Volume)
  3. Group (Volume)
    1. Random Effects (RFx, OLS) (Volume)
    2. Weighted Random Effects (WRFx, WLS) (Volume)
    3. Fixed Effects (FFx) (Volume)
  4. Output and visualization (Volume)
  5. Correction for Multiple Comparisons/Cluster Analysis (Volume)

MISC (old)

FsFastWorkFlows (last edited 2011-01-13 18:01:10 by TylerTriggs)