Differences between revisions 15 and 40 (spanning 25 versions)
⇤ ← Revision 15 as of 2004-09-03 12:02:49 →
Size: 601
Editor: DavidTuch
Comment: added individual retinotopy
← Revision 40 as of 2008-02-01 20:28:11 → ⇥
Size: 1551
Editor: PratapKunwar
Comment:
Deletions are marked like this. Additions are marked like this.
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== Analysis ==
 === IndividualAnalysis ===		 [wiki:Self:FreeSurferWiki top]
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  * FsFastIndividualVolumeAnalysis
  * FsFastIndividualSurfaceAnalysis
  * FsFastIndividualRetinotopyAnalysis		 = FS-Fast Work Flows =
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 === GroupAnalysis ===
  * FsFastGroupVolumeRandomEffectsAnalysis
  * FsFastGroupSurfaceRandomEffectsAnalysis		  * FsFastAnlysisBySteps
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  * FsFastGroupVolumeFixedEffectsAnalysis
  * FsFastGroupSurfaceFixedEffectsAnalysis		 == Overview and Data Hierarchy ==
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  * FsFastGroupVolumeRoiAnalysis
  * FsFastGroupSurfaceRoiAnalysis		  * FsFastOverview
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 === InterGroupComparison === == PreAnalysis ==
 1. FsFastUnpackData
 1. FsFastLinkAnatData
 1. FsFastCreateParadigmFile
 1. FsFastPreprocessData
 1. FsFastRegisterToStructural
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  * FsFastInterGroupVolumeComparison
  * FsFastInterGroupSurfaceComparison		 === First-Level (Individual)Analysis ===
 1. FsFastFirstLevelAnalysis
 1. FsFastComputeIndividualStatistics
 1. FsFastVisualizeIndividualVolume
 1. FsFastVisualizeIndividualSurface
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== Sequence Design ==
  * OptimalSequenceDesign		 === Higher-Level (Group) Analysis ===
 * FsFastGroupAnalysisOverview
 * FsFastVolumeBasedGroupAnalysis
 * FsFastSurfaceBasedGroupAnalysis
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=== GroupVolumeAnalysis ===
 * AssembleData (isxconcat-sess)
 * GlmAnalysis (mri_glmfit)

=== GroupSurfaceAnalysis ===

   1. Assemble the Data (Volume)
   2. Quality Assurance (Volume)
   3. Group (Volume)
         1. Random Effects (RFx, OLS) (Volume)
         2. Weighted Random Effects (WRFx, WLS) (Volume)
         3. Fixed Effects (FFx) (Volume)
   4. Output and visualization (Volume)
   5. Correction for Multiple Comparisons/Cluster Analysis (Volume)

=== MISC (old) ===

 * FsFastGroupVolumeRandomEffectsAnalysis
 * FsFastGroupSurfaceRandomEffectsAnalysis

 * FsFastGroupVolumeFixedEffectsAnalysis
 * FsFastGroupSurfaceFixedEffectsAnalysis

 * FsFastGroupVolumeRoiAnalysis
 * FsFastGroupSurfaceRoiAnalysis

 * FsFastInterGroupVolumeComparison
 * FsFastInterGroupSurfaceComparison

 * FsFastIndividualAnalysis
 * FsFastIndividualRetinotopyAnalysis
 * FsFastAbBlockedAnalysis

[wiki:FreeSurferWiki top]

FS-Fast Work Flows

Overview and Data Hierarchy

PreAnalysis

  1. FsFastUnpackData

  2. FsFastLinkAnatData

  3. FsFastCreateParadigmFile

  4. FsFastPreprocessData

  5. FsFastRegisterToStructural

First-Level (Individual)Analysis

  1. FsFastFirstLevelAnalysis

  2. FsFastComputeIndividualStatistics

  3. FsFastVisualizeIndividualVolume

  4. FsFastVisualizeIndividualSurface

Higher-Level (Group) Analysis

GroupVolumeAnalysis

GroupSurfaceAnalysis

  1. Assemble the Data (Volume)
  2. Quality Assurance (Volume)
  3. Group (Volume)
    1. Random Effects (RFx, OLS) (Volume)
    2. Weighted Random Effects (WRFx, WLS) (Volume)
    3. Fixed Effects (FFx) (Volume)
  4. Output and visualization (Volume)
  5. Correction for Multiple Comparisons/Cluster Analysis (Volume)

MISC (old)

FsFastWorkFlows (last edited 2011-01-13 18:01:10 by TylerTriggs)