Differences between revisions 3 and 7 (spanning 4 versions)
Revision 3 as of 2004-09-09 11:45:19
Size: 393
Editor: JoshSnyder
Comment:
Revision 7 as of 2005-07-26 15:58:24
Size: 355
Editor: JoshSnyder
Comment:
Deletions are marked like this. Additions are marked like this.
Line 1: Line 1:
 ["preproc-sess"] -smout [smfmc6] -fwhm [6]  ["preproc-sess"] -smout <smfmc6> -fwhm <fwhm>
Line 3: Line 3:
[[BR]]  <fwhm>=6 is typical.
Line 5: Line 5:
This procedure consists of several sub-steps that can be invoked individually. They should only be run instead of, not in addition to ["preproc-sess"].
 
  1. [[Include(FsFastMotionCorrect, , 6)]]
 Check <smfmc6>.report in functional subdirectory for indications of problems with data. See ["FsFastTutorial/800 Normalize signal intensity"] for details.
Line 9: Line 7:
  1. [[Include(FsFastSmooth, , 6)]]

  1. [[Include(FsFastNormalizeIntensity, , 6)]]

  1. [[Include(FsFastMakeBrainMask, , 6)]]
 Check severity of motion by plotting motion correction translation component versus time point with ["plot-twf-sess"].
  • ["preproc-sess"] -smout <smfmc6> -fwhm <fwhm>

    <fwhm>=6 is typical.

    Check <smfmc6>.report in functional subdirectory for indications of problems with data. See ["FsFastTutorial/800 Normalize signal intensity"] for details. Check severity of motion by plotting motion correction translation component versus time point with ["plot-twf-sess"].

FsFastPreprocessData (last edited 2009-02-13 10:18:36 by DanielGoldenholz)