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| [wiki:Self:FreeSurferWiki top] | [wiki:Self:WorkFlows previous] | [wiki:Self:BasicReconstruction next] = FreeSurfer Work Flows = |
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| * [wiki:/FreeSurferWorkFlows/StructuralAnalysis StructuralAnalysis] * [wiki:/FreeSurferWorkFlows/FunctionalAnalysis FunctionalAnalysis] * [wiki:/FreeSurferWorkFlows/DiffusionAnalysis DiffusionAnalysis] |
Recommended: * BasicReconstruction (fully automated) * TroubleshootingReconstruction (if the automated programs fail, manual intervention required) * HistoricalReconstruction (semi-automated, with routine use of manual edits to segmented white matter volume) * SubcorticalSegmentation (already included in Basic workflow, but must be done separately if using Historical workflow) |
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| User Contributed: * FreeSurferAnatomicalReconstruction * FreeSurferOccipitalFlattenedPatch * FreeSurferIndividualAnalysis * FreeSurferGroupAnalysis * FreeSurferRemoteAccess |
[wiki:FreeSurferWiki top] | [wiki:WorkFlows previous] | [wiki:BasicReconstruction next]
FreeSurfer Work Flows
FreeSurferWorkFlows describes processing workflows for FreeSurfer. FreeSurferWorkFlows includes:
Recommended:
BasicReconstruction (fully automated)
TroubleshootingReconstruction (if the automated programs fail, manual intervention required)
HistoricalReconstruction (semi-automated, with routine use of manual edits to segmented white matter volume)
SubcorticalSegmentation (already included in Basic workflow, but must be done separately if using Historical workflow)
User Contributed: