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 * ArticlesSlidesAndPosters - Background describing the techniques used in the !FreeSurfer tools, and poster presentations of research making use of the !FreeSurfer tools.  * ArticlesSlidesAndPosters - Background describing the techniques used in the !FreeSurfer tools, and their usage in research.
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 * FreeSurferSupport  * FreeSurferSupport - Mailing lists and helplines which provide user support for !FreeSurfer

Welcome

Software

Documentation

  • WorkFlows - Information on the how the FreeSurfer tools are used in a processing stream.

  • ArticlesSlidesAndPosters - Background describing the techniques used in the FreeSurfer tools, and their usage in research.

  • ["Tutorials"] - A walk-through of a FreeSurfer work-flow, covering editing and troubleshooting techniques in-depth, as well as a group study example.

  • ["ToolsAndCommands"] - GUI and command-line tool documentation.

  • FileFormats - Description of native FreeSurfer file formats, as well as external file formats used by FreeSurfer.

  • CoordinateSystems - Details on the voxel and RAS coordinate systems used in FreeSurfer.

  • DevelopersGuide - Information for developers of the FreeSurfer code-base (Martinos Center internal).

Support

  • FreeSurferSupport - Mailing lists and helplines which provide user support for FreeSurfer

WikiGuidelines

BeginnersGuides

Acknowledgements

FreeSurferWiki (last edited 2026-06-26 09:24:36 by buildqa)