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Revision 5 as of 2021-02-17 13:31:21
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Editor: MeenaMakary
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Revision 10 as of 2021-02-17 19:06:16
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Editor: MeenaMakary
Comment:
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## page was renamed from brainPET
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This function generates pseudoCT mu-map using SPM8 atlas-based method (David Izquierdo-Garcia et al.)

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= Bullet list =
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perl brainPET_ perl brainPET_pCT_AeMir.pl -i /<DIR>/<SUJID>/MR/MPRAGE -f 107000-000005-000001.dcm -c 0
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---- /!\ '''Edit conflict - your version:''' ----

= Bullet list =
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{{{
perl brainPET_pCT_AeMir.pl -i /<DIR>/<SUJID>/MR/MPRAGE -f 107000-000005-000001.dcm -c 0
}}}

 * item 2

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= Devolopment Version = = Development Version =

Index

BrainPET

HI

Aether-Mirror Version

PseudoCT mu-map generation

This function generates pseudoCT mu-map using SPM8 atlas-based method (David Izquierdo-Garcia et al.)


/!\ Edit conflict - other version:


Bullet list

  • item 1
  • item 2, with gap
  • item 3
    • item 3.1

perl brainPET_pCT_AeMir.pl -i /<DIR>/<SUJID>/MR/MPRAGE -f 107000-000005-000001.dcm -c 0


/!\ Edit conflict - your version:


Bullet list

  • item 1

perl brainPET_pCT_AeMir.pl -i /<DIR>/<SUJID>/MR/MPRAGE -f 107000-000005-000001.dcm -c 0
  • item 2


/!\ End of edit conflict


Supporting Functions

Denoise MPRAGE

perl brainPET_denoise_mprage.pl -i /<DIR>/<SUBJID>/MR_PET/cp_iso_mprage.nii -t 25 -s 0

ifile2nifti

perl brainPET_ifile2nifti.pl -i /<DIR>/file.i

Development Version

BrainPET (last edited 2021-11-09 12:13:59 by MeenaMakary)