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||8:30 - 9:00 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/unix_tutorial_FS_course.ppt|Unix Tutorial for FreeSurfer Users]] ||talk/tutorial ||Allison Moreau || ||8:30 - 9:00 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/unix_tutorial_FS_course.ppt|Unix Tutorial for FreeSurfer Users]] ||talk/tutorial ||Allison Stevens ||

FreeSurfer Course, August 10-12

Wednesday, August 10th - Introduction / Single Subject Analysis /Troubleshooting

Time

Title

Type

Lecturer

8:30 - 9:00

optional - Unix Tutorial for FreeSurfer Users

talk/tutorial

Allison Stevens

9:00 - 9:15

optional - Intro to FreeSurfer Jargon

talk

Allison Stevens & Lilla Zollei

9:15 - 9:30

break

9:30 - 10:00

Introduction to Freesurfer

talk

Emily Lindemer

10:00 - 11:00

Analyzing the Individual Subject

talk

Emily Lindemer

11:00 - 11:40

NRU - A high resolution in vivo atlas of the human brain's serotonin system

11:40 - 12:40

Lunch

--

--

12:40 - 1:00

Freeview demonstration

demo

Allison Stevens

1:00 - 2:00

Interaction with Individual Subject Data Tutorial

tutorial

staff

2:00 - 2:45

FreeSurfer Troubleshooting

talk

Allison Stevens

2:45 - 3:00

Freeview Troubleshooting demonstration

demo

Allison Stevens

3:00 - 3:20

break

3:20 - 4:20

Troubleshooting Tutorial

tutorial

staff

4:20 - 5:20

Quality Checking a Recon

demo

Allison Stevens

5:20 - 5:30

Question and Answer Session (Answers to online questions here)

talk

staff

Thursday, August 11th - Group Analysis / ROI Analysis / Longitudinal

Time

Title

Type

Lecturer

11:30 - 12:10

Surface-based Analysis: Intersubject Smoothing & Registration

talk

Lilla Zollei

9:00 - 9:30

** Basics of Group Analysis

talk

Emily Lindemer

9:30 - 10:10

Group Analysis

talk

Emily Lindemer

10:20 - 10:40

break

10:40 - 11:20

Group Analysis Tutorial

tutorial

staff

11:20 - 11:40

Multiple Comparisons

talk

Emily Lindemer

11:40 - 12:00

QDEC demonstration

demo

Martin Reuter

12:00 - 1:00

Lunch

--

--

1:00 - 1:20

Multiple Comparisons Tutorial

tutorial

staff

1:20 - 2:00

QDEC Tutorial

tutorial

staff

2:00 - 2:30

ROI Analysis

talk

Martin Reuter

2:30 - 2:50

break

2:50 - 3:20

ROI Analysis Tutorial

tutorial

staff

3:20 - 3:50

Longitudinal FreeSurfer see also: LongitudinalProcessing

talk

Martin Reuter

3:50 - 4:30

Longitudinal Tutorial

tutorial

staff

5:30 - 5:45

Question and Answer Session (Answers to online questions here)

talk

staff

Friday, August 12th - Multimodal / Diffusion / Future Directions

Time

Title

Type

Lecturer

8:30 - 9:00

Multi-Modal Integration

talk

Lilla Zollei

1:10 - 2:25

Multi-Modal Integration Tutorial

tutorial

staff

9:15 - 10:00

Introduction to Diffusion MRI

talk

Lilla Zollei

11:40 - 12:40

Lunch

--

--

11:40 - 12:40

NRU - PLS applied to PET data in SAD

--

--

2:25 - 2:45

break & Evaluation

2:45 - 3:35

TRActs Constrained by UnderLying Anatomy (TRACULA)

talk

Lilla Zollei

3:35 - 4:20

Tracula Tutorial

tutorial

staff

4:20 - 4:50

Future Directions

talk

Martin Reuter

4:50 - 5:05

Question and Answer Session (Answers to online questions here), FsQuiz

talk

staff

No time?

optional technical talk - Registration Methods

talk

Lilla Zollei

FsTutorial/CphAug2016CourseSchedule (last edited 2017-09-26 11:40:50 by MorganFogarty)