Deletions are marked like this. | Additions are marked like this. |
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|| 11:45 - 12:15 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/fs.surface-based-analysis.ppt|Surface-based Smoothing/Surface-based Registration|&do=get]] || talk || Doug Greve || || 12:45 - 1:15 || '''lunch''' || || || || 1:15 - 2:15 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/fs.roi.ppt|ROI Analysis|&do=get]] || talk || Doug Greve || || 2:15 - 2:45 || [[FsTutorial/AnatomicalROI|ROI Analysis]] || tutorial || staff || |
|| 11:45 - 12:15 || MRI Acquisition Methods for Morphometry || talk || Andre van der Kouwe || || 12:15 - 12:30 || '''break''' || || || || 12:30 - 1:00 || '''Working lunch''' Optional talk - Combined Gray Matter/White Matter Analysis of the Aging Brain || talk || David Salat || || 1:00 - 1:30 || '''Lunch''' || || || || 1:30 - 2:15 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.applications.2009.ppt|FreeSurfer Applications|&do=get]] || talk || David Salat || || 2:15 - 2:45 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/fs.surface-based-analysis.ppt|Surface-based Smoothing/Surface-based Registration|&do=get]] || talk || Doug Greve || |
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|| 3:45 - 4:45 || [[FsTutorial/GroupAnalysis|Group Analysis / Multiple Comparisons - mri_glmfit]] || tutorial || staff || || 4:45 - 5:00 || QDEC demonstration || demo || Doug Greve || |
|| 3:45 - 4:00 || QDEC demonstration || demo || Doug Greve/Allison Stevens || || 4:00 - 5:00 || [[FsTutorial/GroupAnalysis|Group Analysis / Multiple Comparisons - mri_glmfit]] || tutorial || staff || |
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=== Friday, February 12th - ROIs / Troubleshooting / Multi-Modal / Q&A / Future Directions === | === Friday, February 12th - ROIs / Troubleshooting / Multi-Modal / Q&A === |
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|| 9:30 - 10:00 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.longitudinal.ppt|Longitudinal FreeSurfer|&do=get]] || talk || David Salat || || 10:00 - 10:45 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.applications.2009.ppt|FreeSurfer Applications|&do=get]] || talk || David Salat || || 10:45 - 11:00 || '''break''' || || || || 11:00 - 11:30 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.failure_modes.2009.ppt|Failure Modes|&do=get]] || talk || Doug Greve|| || 11:30 - 12:30 || [[FsTutorial/TroubleshootingData|Troubleshooting]], Troubleshooting demonstration || tutorial || staff, Allison || || 12:30 - 1:00 || '''Working lunch''' Optional demo - Step-by-Step Through a Recon || demo || TBD || || 1:00 - 1:30 || '''Working lunch''' Optional talk - Combined Gray Matter/White Matter Analysis of the Aging Brain || talk || David Salat || || 1:30 - 2:45 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/fs.multimodal-integration.ppt|Multi-Modal Integration: ROI and Surface-based Analysis|&do=get]] || talk || Doug Greve || || 2:45 - 3:45 || [[FsTutorial/MultiModal|Multi-Modal Integration]] || tutorial || staff || || 3:45 - 4:00 || '''break''' || || || || 4:00 - 5:00 || Future Directions of !FreeSurfer: || || || |
|| 9:30 - 10:30 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/fs.roi.ppt|ROI Analysis|&do=get]] || talk || Doug Greve || || 10:30 - 11:00 || [[FsTutorial/AnatomicalROI|ROI Analysis]] || tutorial || staff || || 11:00 - 11:30 || '''break''' || || || || 11:30 - 12:00 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.failure_modes.2009.ppt|Failure Modes|&do=get]] || talk || Allison Stevens|| || 12:00 - 12:30 || Step-by-Step Through a Recon, Troubleshooting Tutorial demonstration || demo || Allison || || 12:30 - 1:30 || [[FsTutorial/TroubleshootingData|Troubleshooting]] || tutorial || staff || || 1:30 - 2:00 || '''lunch''' || || || || 2:00 - 3:15 || [[ftp://surfer.nmr.mgh.harvard.edu/pub/docs/fs.multimodal-integration.ppt|Multi-Modal Integration: ROI and Surface-based Analysis|&do=get]] || talk || Doug Greve || || 3:15 - 4:15 || [[FsTutorial/MultiModal|Multi-Modal Integration]] || tutorial || staff || || 4:15 - 4:30 || '''break''' || || || || 4:30 - 5:15 || fMRI || talk || Doug Greve || |
FreeSurfer Course, 11-12 February 2010
Cape Town, South Africa
Centre for High Performance Computing (CHPC), map
Thursday, February 11th - Introduction / Single Subject / Group Analysis
Time |
Title |
Type |
Lecturer |
8:00 - 8:30 |
optional - Unix Tutorial for FreeSurfer Users 1. Surrey, 2. O'Reilly |
tutorial |
Allison Stevens |
8:30 - 9:00 |
Course Registration |
sign-in |
|
9:00 - 9:30 |
talk |
David Salat |
|
9:30 - 10:30 |
talk |
Doug Greve |
|
10:30 - 10:45 |
break |
|
|
10:45 - 11:15 |
Tkmedit/Tksurfer demonstration |
demo |
Doug Greve |
11:15 - 11:45 |
tutorial |
staff |
|
11:45 - 12:15 |
MRI Acquisition Methods for Morphometry |
talk |
Andre van der Kouwe |
12:15 - 12:30 |
break |
|
|
12:30 - 1:00 |
Working lunch Optional talk - Combined Gray Matter/White Matter Analysis of the Aging Brain |
talk |
David Salat |
1:00 - 1:30 |
Lunch |
|
|
1:30 - 2:15 |
talk |
David Salat |
|
2:15 - 2:45 |
talk |
Doug Greve |
|
2:45 - 3:00 |
break |
|
|
3:00 - 3:45 |
talk |
Doug Greve |
|
3:45 - 4:00 |
QDEC demonstration |
demo |
Doug Greve/Allison Stevens |
4:00 - 5:00 |
tutorial |
staff |
|
5:00 - 5:45 |
tutorial |
staff |
Friday, February 12th - ROIs / Troubleshooting / Multi-Modal / Q&A
Time |
Title |
Type |
Lecturer |
9:00 - 9:30 |
talk |
David Salat |
|
9:30 - 10:30 |
talk |
Doug Greve |
|
10:30 - 11:00 |
tutorial |
staff |
|
11:00 - 11:30 |
break |
|
|
11:30 - 12:00 |
talk |
Allison Stevens |
|
12:00 - 12:30 |
Step-by-Step Through a Recon, Troubleshooting Tutorial demonstration |
demo |
Allison |
12:30 - 1:30 |
tutorial |
staff |
|
1:30 - 2:00 |
lunch |
|
|
2:00 - 3:15 |
talk |
Doug Greve |
|
3:15 - 4:15 |
tutorial |
staff |
|
4:15 - 4:30 |
break |
|
|
4:30 - 5:15 |
fMRI |
talk |
Doug Greve |