Deletions are marked like this. | Additions are marked like this. |
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||8:00 - 8:30 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/unix_tutorial_FS_course.ppt|Unix Tutorial for FreeSurfer Users]] [[http://www.ee.surrey.ac.uk/Teaching/Unix|1. Surrey]], [[http://docstore.mik.ua/orelly/linux/lnut/index.htm|2. O'Reilly]] ||tutorial ||Allison Stevens || | ||8:00 - 8:30 ||'''optional -''' [[http://surfer.nmr.mgh.harvard.edu/pub/docs/unix_tutorial_FS_course.ppt|Unix Tutorial for FreeSurfer Users]] [[http://www.ee.surrey.ac.uk/Teaching/Unix|1. Surrey]], [[http://docstore.mik.ua/orelly/linux/lnut/index.htm|2. O'Reilly]] ||tutorial || Pedro Paulo || |
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||9:00 - 9:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.intro.ppt|Introduction to Freesurfer]] ||talk ||Bruce Fischl || ||9:30 - 10:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsrecon.ppt|Analyzing the Individual Subject]] ||talk ||Doug Greve || |
||9:00 - 9:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.intro.ppt|Introduction to Freesurfer]] ||talk || Nick Schmansky || ||9:30 - 10:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fsrecon.ppt|Analyzing the Individual Subject]] ||talk || Allison Stevens || |
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||10:45 - 11:15 ||Tkmedit/Tksurfer demonstration ||demo ||Doug Greve || | ||10:45 - 11:15 ||Tkmedit/Tksurfer demonstration ||demo || Nick Schmansky || |
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||11:45- 12:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.failure_modes.ppt|Failure Modes]] ||talk ||Bruce Fischl || | ||11:45- 12:15 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.failure_modes.ppt|Failure Modes]] ||talk || Allison Stevens || |
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||2:45 - 3:15 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.applications.ppt|FreeSurfer Applications]] ||talk || David Salat || | ||2:45 - 3:15 || [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.applications.ppt|FreeSurfer Applications]] ||talk || Nick Schmansky || |
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||4:15 - 4:45 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.longitudinal.ppt|Longitudinal FreeSurfer]] ''see also:'' LongitudinalProcessing ||talk ||Martin Reuter || | ||4:15 - 4:45 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.longitudinal.ppt|Longitudinal FreeSurfer]] ''see also:'' LongitudinalProcessing ||talk || Lilla Zollei || |
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||11:15 - 11:45 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/tracula,fs.ppt|TRActs Constrained by UnderLying Anatomy (TRACULA)]] ||talk ||Anastasia Yendiki || | ||11:15 - 11:45 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/tracula,fs.ppt|TRActs Constrained by UnderLying Anatomy (TRACULA)]] ||talk || Lilla Zollei || |
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||1:45 - 2:45 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.roi.ppt|ROI Analysis]] ||talk ||Doug Greve || | ||1:45 - 2:45 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.roi.ppt|ROI Analysis]] ||talk || Allison Stevens || |
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||3:30 - 4:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.groupanalysis.ppt|Group Analysis / GLM / Multiple Comparisons]] ||talk ||Mert Sabuncu || | ||3:30 - 4:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.groupanalysis.ppt|Group Analysis / GLM / Multiple Comparisons]] ||talk || Lilla Zollei || |
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||1:00 - 1:30 ||[[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.reliability.ppt|Accuracy, Reliability and Validation]] ||talk ||David Salat || ##||1:30 - 1:50 ||Future Directions: [[http://surfer.nmr.mgh.harvard.edu/pub/docs/freesurfer.inferring_architectonics.ppt|Inferring architectonic boundaries from in-vivo MRI]] ||talk ||Bruce Fischl || |
FreeSurfer Tutorial and Workshop in São Paulo, Brazil
16, 17, & 18 April 2011
The FreeSurfer Development Team is hosting a three-day course for beginner and experienced users of FreeSurfer. Day 1 will be an introduction to FreeSurfer (or a refresher for those more experienced). Day 2 will cover everything you need to know for analyzing your data. Topics are listed below. There are only 30 available spots for this course. The course will not cover FS-FAST or fMRI analysis.
Computers will be provided to all pairs of registrants, which will have FreeSurfer and data already installed. Attendees will work in pairs (sharing a computer).
The course will be held at São Paulo healthcare complex of HCFMUSP.
Contact: Pedro Paulo de M. Oliveira Jr. ( ppj at netfilter dot com dot br )
Location
Hospital das Clínicas - .kmz - Avenida Dr Eneas de Carvalho Aguiar, 44 - São Paulo - SP - Brazil - (hotel,map)
The course will be held at the Cancer Center Building, in the 6th floor auditorium.
Monday, April 4th - Introduction / Single Subject / MRI / Longitudinal/ Troubleshooting
Time |
Title |
Type |
Lecturer |
8:00 - 8:30 |
optional - Unix Tutorial for FreeSurfer Users 1. Surrey, 2. O'Reilly |
tutorial |
Pedro Paulo |
8:30 - 9:00 |
optional - Intro to FreeSurfer Jargon |
talk |
Allison Stevens |
8:30 - 9:00 |
Course Registration |
sign-in |
|
9:00 - 9:30 |
talk |
Nick Schmansky |
|
9:30 - 10:30 |
talk |
Allison Stevens |
|
10:30 - 10:45 |
break |
|
|
10:45 - 11:15 |
Tkmedit/Tksurfer demonstration |
demo |
Nick Schmansky |
11:15 - 11:45 |
tutorial |
staff |
|
11:45- 12:15 |
talk |
Allison Stevens |
|
12:15 - 1:15 |
Lunch |
-- |
-- |
1:15 - 2:15 |
Troubleshooting Demonstration, Troubleshooting Tutorial |
tutorial |
staff, Allison |
2:45 - 3:15 |
talk |
Nick Schmansky |
|
3:15 - 3:30 |
break |
|
|
3:30 - 4:15 |
Registration Methods |
talk |
Lilla Zollei |
4:15 - 4:45 |
talk |
Lilla Zollei |
|
4:45 - 5:30 |
Longitudinal tutorial |
tutorial |
staff |
Tuesday, April 5th - Group Analysis/ ROIs / Registration / Diffusion
Time |
Title |
Type |
Lecturer |
8:15 - 9:00 |
Quality Checking a Recon |
demo |
Allison Stevens |
9:00 - 11:00 |
talk |
Lilla Zollei |
|
11:00 - 11:15 |
break |
|
|
11:15 - 11:45 |
talk |
Lilla Zollei |
|
11:45 - 12:45 |
Diffusion Processing Tutorial |
tutorial |
staff |
12:45 - 1:45 |
Lunch |
-- |
-- |
1:45 - 2:45 |
talk |
Allison Stevens |
|
2:45 - 3:15 |
tutorial |
staff |
|
3:15 - 3:30 |
break |
|
|
3:30 - 4:30 |
talk |
Lilla Zollei |
|
4:30 - 5:00 |
QDEC demonstration |
demo |
Nick Schmansky |
5:00 - 6:00 |
tutorial |
staff |
|
5:00 - 6:00 |
tutorial |
staff |
Wednesday, April 6th - Multi-Modal / Future Directions / fMRI / Q&A
8:30 - 9:45 |
FSFAST |
talk |
Doug Greve |
9:45 - 10:00 |
break |
|
|
10:00 - 11:00 |
FSFAST |
talk |
Doug Greve |
11:00 - 12:00 |
FSFAST |
tutorial |
staff |
12:00 - 1:00 |
Lunch |
-- |
-- |
1:50 - 2:15 |
break & Evaluation |
|
|
4:30 - 5:00 |
Question and Answer Session, FsQuiz |
talk |
staff |