Easyfreesurfer is a simple script which was written to simplify and automate most freesurfer processes. It controls some commands such as; recon-all and mri_convert without writing any command in terminal, hence user will only need to use mouse to select options and click buttons. Two scripts have been written, one works on Mac OS X and Linux (bash script). The other is an applescript which works with both shell types bash and tcsh but it is suitable for Mac OS X only.

1- Applescript

Please click on the link below to download script;

Easy freesurfer

2- Bash script

This script will be added soon!