AnatomiCuts correspondences
This method finds corresponding clusters across subjects. Currently, only one-to-one cluster's correspondences are available using the Hungarian algorithm.
The Hungarian algorithm
The Hungarian algorithm finds corresponding clusters between two subjects.
AnatomiCuts_correspondences -s1 segmentation1.nii.gz -s2 segmentation2.nii.gz -c numClusters -h1 clusteringPath1 -h2 clusteringPath2 -m metric -o output.csv
-s1 the segmentation to be used for anatomical similarity in subject one. -s2 the segmentation to be used for anatomical similarity in subject one. -h1 the path to the AnatomiCuts folder to be used for subject1. -h2 the path to the AnatomiCuts folder to be used for subject2. -m metric to be used: labels (anatomical similarity) or euclid (euclidean similarity). -sym (under development) this flag will mirror the segmentation in subject 2 to find between hemisphere correspondences. -o output csv file